Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017957.1 Corchorus olitorius cultivar O-4 contig17990, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26959

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1008--1118
30
3.7
30
92
0
177
25
24
26
24
2.00
1177--1206
15
2.0
15
100
0
60
40
33
20
6
1.78
4132--4177
22
2.0
23
84
12
60
58
13
0
28
1.35
5066--5095
15
2.0
15
93
0
51
36
6
13
43
1.70
4886--5243
188
1.9
191
91
4
598
34
18
11
35
1.87
12293--12338
22
2.0
23
83
12
58
30
10
10
47
1.73
24895--25215
166
2.0
160
86
3
444
38
10
16
33
1.84
25667--25783
39
3.0
39
94
0
207
53
3
12
29
1.55
25715--25780
23
3.2
23
61
34
58
56
1
15
27
1.48

Tables:   1

The End!