Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017967.1 Corchorus olitorius cultivar O-4 contig18000, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6661

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2914--2977
21
3.1
21
70
4
67
29
26
7
35
1.85
2904--3058
41
3.8
41
88
5
231
27
27
7
36
1.84
3002--3068
20
3.1
22
63
10
57
28
31
5
34
1.81
2891--3101
83
2.7
84
84
9
248
29
27
7
35
1.83
3038--3317
33
8.5
33
98
0
524
34
27
6
31
1.82
5825--6221
198
2.0
198
99
0
785
34
18
19
27
1.95

Tables:   1

The End!