Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017972.1 Corchorus olitorius cultivar O-4 contig18005, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22439

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
318--346
3
9.7
3
100
0
58
68
0
0
31
0.89
482--563
28
2.9
29
82
14
107
23
15
10
50
1.76
748--810
29
2.1
30
85
2
83
49
15
14
20
1.80
10313--10379
21
3.2
21
68
16
66
50
13
5
29
1.65
10300--10379
42
1.9
42
97
0
151
47
13
7
31
1.71
12862--12904
22
2.0
22
85
0
59
37
16
13
32
1.88
13994--14025
2
16.0
2
100
0
64
50
0
0
50
1.00
15234--15539
153
2.0
152
94
0
540
19
27
23
29
1.98
17620--17686
20
3.2
20
70
25
66
22
5
28
43
1.76
18356--18435
40
2.0
40
100
0
160
52
12
15
20
1.74
19213--22439
329
9.8
327
79
6
3224
33
15
15
35
1.89
19213--22432
986
3.3
979
85
4
3701
33
15
15
35
1.89
19213--22432
656
4.9
654
87
3
3729
33
15
15
35
1.89

Tables:   1

The End!