Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017974.1 Corchorus olitorius cultivar O-4 contig18007, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5436

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--783
330
2.4
330
79
7
829
32
15
16
35
1.90
1098--1134
20
1.9
20
88
5
58
67
0
0
32
0.91
3828--4053
62
3.6
62
95
1
400
34
21
39
3
1.71
4054--4119
34
1.9
34
100
0
132
46
18
31
3
1.64
4938--5045
45
2.4
45
85
1
128
37
16
25
21
1.94
4968--5061
45
2.1
45
95
0
170
30
20
24
24
1.98

Tables:   1

The End!