Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017994.1 Corchorus olitorius cultivar O-4 contig18027, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13895

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
395--429
2
17.5
2
100
0
70
51
0
0
48
1.00
638--686
20
2.5
20
83
6
64
24
16
22
36
1.94
10924--10984
6
10.3
6
76
15
56
78
0
18
3
0.88
10929--10968
13
3.2
13
85
3
55
77
0
20
2
0.88
10923--11011
18
4.9
17
76
20
83
75
0
17
6
1.02
10922--10984
11
5.5
11
78
10
63
76
0
20
3
0.93
12174--12230
24
2.4
24
79
5
62
35
1
10
52
1.46
12174--12230
12
4.8
11
73
14
51
35
1
10
52
1.46

Tables:   1

The End!