Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018012.1 Corchorus olitorius cultivar O-4 contig18045, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23756

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13468--13618
39
3.9
39
89
5
218
23
19
35
21
1.96
13648--13703
6
9.3
6
94
0
94
19
0
30
50
1.48
17060--17207
38
3.9
38
90
1
226
24
18
34
22
1.96
17237--17292
6
9.3
6
94
0
94
19
0
30
50
1.48
21791--21826
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!