Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018013.1 Corchorus olitorius cultivar O-4 contig18046, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66400

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3273--3298
4
6.5
4
100
0
52
23
0
0
76
0.78
7675--7783
54
2.0
54
94
0
191
24
18
24
32
1.97
7748--8137
35
11.1
35
82
6
455
26
13
19
40
1.89
9694--9719
13
2.0
13
100
0
52
23
7
15
53
1.67
11763--11813
26
2.0
26
92
0
84
56
3
3
35
1.36
22141--22181
21
2.0
21
95
0
73
9
26
41
21
1.84
22350--22394
21
2.1
21
95
0
81
40
22
8
28
1.84
22679--22720
10
4.2
10
82
8
50
16
0
2
80
0.81
23736--23784
10
5.0
10
92
2
73
20
32
10
36
1.86
23736--23784
20
2.5
20
90
3
82
20
32
10
36
1.86
36618--36663
18
2.6
18
77
16
51
28
19
10
41
1.85
39035--39102
31
2.2
31
89
2
102
39
14
16
29
1.88
42236--42271
16
2.1
19
85
15
51
52
30
5
11
1.59
52444--52488
23
2.0
23
91
4
74
33
33
17
15
1.92
53536--53564
2
14.5
2
100
0
58
0
48
0
51
1.00
64981--65049
28
2.4
29
87
2
104
40
26
13
20
1.88

Tables:   1

The End!