Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018014.1 Corchorus olitorius cultivar O-4 contig18047, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35492

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20552--20630
31
2.5
31
90
8
108
35
8
21
34
1.85
21020--21070
24
2.1
25
85
10
70
17
3
5
72
1.20
21017--21070
21
2.6
21
75
13
58
18
3
5
72
1.20
25417--25509
49
2.0
47
91
6
152
38
21
5
34
1.76
25765--25895
66
2.0
66
96
0
244
43
13
13
29
1.83
31451--31491
2
20.5
2
100
0
82
51
0
0
48
1.00
31656--31695
20
2.0
20
90
4
64
12
5
15
67
1.38

Tables:   1

The End!