Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018020.1 Corchorus olitorius cultivar O-4 contig18053, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10617

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
619--671
16
3.3
16
81
0
61
20
32
1
45
1.62
1480--1573
32
2.9
32
95
0
170
27
17
3
52
1.60
1758--1789
17
1.9
17
93
6
57
28
0
0
71
0.86
1758--1796
17
2.4
17
86
4
53
28
5
0
66
1.12
2311--2341
16
1.9
16
93
0
53
12
19
25
41
1.87
2716--2762
22
2.1
22
88
0
67
25
12
0
61
1.31
3767--3800
17
2.0
17
88
0
50
55
0
2
41
1.15
4002--4108
51
2.1
51
82
3
126
52
1
5
40
1.36
4458--4614
77
2.0
77
95
0
278
35
10
1
52
1.45
5166--5309
57
2.5
57
94
2
243
20
18
28
33
1.96
5274--5316
15
2.8
15
76
16
52
11
20
32
34
1.89

Tables:   1

The End!