Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018027.1 Corchorus olitorius cultivar O-4 contig18060, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26819

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8283--8317
17
2.1
17
88
0
52
42
0
22
34
1.54
10148--10296
78
2.0
74
85
12
202
39
8
14
37
1.77
10365--10399
2
17.5
2
100
0
70
48
0
0
51
1.00
11817--11899
43
1.9
43
87
7
123
42
4
10
42
1.61
25606--25633
14
2.0
14
100
0
56
42
14
14
28
1.84
25757--25789
10
3.4
10
95
4
59
33
18
9
39
1.82

Tables:   1

The End!