Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018041.1 Corchorus olitorius cultivar O-4 contig18074, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32034

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7492--7521
3
9.7
3
92
7
51
70
0
0
30
0.88
11059--11113
22
2.5
22
93
0
92
3
27
50
18
1.63
16233--16306
27
2.7
27
95
0
139
44
25
10
18
1.82
20195--20242
19
2.5
19
90
6
71
43
2
0
54
1.12
21117--21181
6
11.0
6
83
9
71
0
23
0
76
0.78
21117--21169
3
17.7
3
76
7
54
0
24
0
75
0.80
21117--21181
17
3.7
19
77
18
70
0
23
0
76
0.78
24952--25045
45
2.2
44
84
7
122
39
19
4
37
1.71
27325--27351
11
2.5
11
100
0
54
0
18
0
81
0.69

Tables:   1

The End!