Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018052.1 Corchorus olitorius cultivar O-4 contig18085, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42797

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--58
27
2.1
27
93
0
98
20
18
22
37
1.94
37--88
26
2.0
26
92
0
86
19
13
28
38
1.89
2575--2623
25
2.0
25
83
0
62
8
22
20
48
1.75
27723--27761
19
2.1
19
95
0
69
41
33
10
15
1.81
27743--27843
27
3.7
27
93
1
157
39
27
14
17
1.89
37625--37666
15
2.7
15
92
3
66
64
14
9
11
1.50
40436--40465
15
2.1
15
93
6
53
63
6
16
13
1.50
40822--40868
21
2.2
21
88
0
67
12
23
46
17
1.82
41111--41150
21
1.9
21
85
10
55
20
20
55
5
1.62

Tables:   1

The End!