Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018057.1 Corchorus olitorius cultivar O-4 contig18090, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9306

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2467--2497
16
1.9
16
93
0
53
38
25
12
22
1.90
5061--5095
2
17.5
2
100
0
70
48
0
0
51
1.00
5481--5520
19
2.1
19
86
9
55
52
7
12
27
1.66
7064--7671
35
17.5
35
76
10
489
20
20
18
39
1.92
7111--7620
106
4.9
105
81
10
446
20
21
18
39
1.93
7066--7671
141
4.3
141
82
7
607
20
20
18
40
1.92
7076--7673
242
2.5
243
91
2
970
20
20
18
39
1.92
7529--7584
31
1.9
27
96
0
67
16
25
19
39
1.91
7882--8243
30
12.2
30
85
4
423
21
14
18
45
1.85
8011--8070
25
2.4
25
80
0
66
21
16
18
43
1.88
7923--8190
145
1.8
145
91
0
437
20
14
19
45
1.85
7893--8221
175
1.9
175
89
1
516
20
13
19
45
1.84
8768--8894
27
4.7
27
92
2
166
18
19
25
36
1.95

Tables:   1

The End!