Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018065.1 Corchorus olitorius cultivar O-4 contig18098, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26082

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29--64
6
6.0
6
86
0
54
13
30
19
36
1.91
1628--1955
41
7.8
41
80
8
351
42
26
10
20
1.84
1628--1956
84
3.9
85
89
4
515
42
26
10
20
1.84
7149--7175
7
3.9
7
100
0
54
14
0
29
55
1.40
8949--9090
49
3.0
47
82
9
169
50
5
16
27
1.67
13547--13630
21
4.0
21
87
0
105
39
47
5
7
1.55
14096--14148
18
2.9
18
94
0
88
33
50
9
5
1.58

Tables:   1

The End!