Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018066.1 Corchorus olitorius cultivar O-4 contig18099, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64982

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3141--3174
17
2.0
17
94
0
59
29
14
32
23
1.94
20190--20246
27
2.1
27
100
0
114
38
14
15
31
1.87
20447--20543
43
2.3
43
98
0
185
32
25
8
32
1.86
20577--20657
41
2.0
41
100
0
162
45
14
12
27
1.81
33482--33533
26
2.0
26
92
0
86
57
3
19
19
1.55
36635--36844
113
1.9
110
91
4
314
41
20
10
28
1.84
46886--46911
3
8.7
3
100
0
52
0
34
30
34
1.58
48335--48364
16
1.9
16
93
6
53
30
6
3
60
1.39
50340--50440
50
2.0
50
90
0
157
34
9
16
38
1.82
55646--55678
14
2.4
14
95
5
59
90
0
9
0
0.44
63612--63639
1
28.0
1
100
0
56
0
0
0
100
0.00

Tables:   1

The End!