Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018074.1 Corchorus olitorius cultivar O-4 contig18107, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34380

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
661--730
36
1.9
36
91
0
113
60
8
10
21
1.55
1181--1527
181
1.9
181
94
0
613
40
7
12
38
1.72
3146--3327
95
1.9
95
91
0
301
25
18
10
45
1.81
11219--11247
12
2.3
13
94
5
51
89
6
0
3
0.57
21877--21927
27
1.9
27
88
4
77
39
3
3
52
1.38
21874--21932
26
2.3
26
82
5
75
37
6
3
52
1.45
22450--22494
20
2.2
20
100
0
90
46
0
8
44
1.34
23247--23369
62
2.1
59
90
7
196
43
8
25
21
1.81

Tables:   1

The End!