Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018079.1 Corchorus olitorius cultivar O-4 contig18112, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28573

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19--64
12
3.9
12
78
16
51
17
8
2
71
1.21
501--525
10
2.5
10
100
0
50
20
8
0
72
1.10
1594--1650
22
2.6
22
72
22
57
52
17
12
17
1.74
16134--16168
11
3.2
11
91
0
61
80
17
2
0
0.84
20635--20702
21
3.2
21
66
15
59
50
13
5
30
1.65
20623--20703
42
1.9
42
92
0
135
48
14
6
30
1.69
20769--20881
56
2.0
56
94
1
201
38
1
24
34
1.66
21765--21840
29
2.6
30
82
4
100
31
11
27
28
1.92
23307--23362
24
2.3
25
84
3
78
1
23
5
69
1.18
24943--24977
6
5.7
6
86
6
52
37
0
2
60
1.12
24941--24977
12
2.9
13
88
8
58
35
0
5
59
1.20
26939--26987
25
2.0
25
92
8
82
44
2
6
46
1.39
28471--28506
2
18.0
2
100
0
72
50
0
0
50
1.00

Tables:   1

The End!