Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018089.1 Corchorus olitorius cultivar O-4 contig18122, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17268

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
375--401
2
13.5
2
100
0
54
48
0
0
51
1.00
4257--4293
17
2.2
17
100
0
74
16
16
24
43
1.87
7187--7241
28
2.0
28
96
0
101
40
14
7
38
1.74
9655--9693
2
19.5
2
100
0
78
48
0
0
51
1.00
9798--9830
16
2.1
16
94
0
57
30
9
21
39
1.84
10315--10438
22
5.7
22
78
2
108
33
14
13
37
1.86
10460--10559
22
4.6
22
73
13
73
37
11
9
43
1.72
12689--12732
13
3.5
13
78
15
56
61
6
0
31
1.22
13640--14472
413
2.0
417
92
2
1397
24
16
16
42
1.87

Tables:   1

The End!