Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018098.1 Corchorus olitorius cultivar O-4 contig18131, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43472

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14262--14340
8
9.4
8
81
10
86
36
1
11
50
1.46
14262--14340
25
3.1
24
80
8
86
36
1
11
50
1.46
14262--14337
33
2.2
35
90
4
120
36
1
10
51
1.45
16291--16579
41
6.9
41
81
13
320
22
11
27
39
1.88
16288--16579
85
3.5
84
89
3
453
22
11
27
39
1.88
17725--17799
37
2.0
37
81
0
87
29
21
14
34
1.93
21142--21262
53
2.3
53
84
2
147
36
13
20
29
1.91
22370--22541
53
3.2
53
93
3
285
35
12
19
31
1.90
25189--25235
2
24.5
2
79
16
55
46
2
2
48
1.25

Tables:   1

The End!