Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018101.1 Corchorus olitorius cultivar O-4 contig18134, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13907

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
379--492
21
5.4
21
89
5
167
26
26
17
29
1.97
2296--2400
33
3.2
31
83
11
120
43
23
7
24
1.80
2332--2445
33
3.4
34
81
7
117
44
19
9
26
1.81
4918--5009
21
4.4
21
91
2
141
27
27
16
29
1.97
12417--12450
17
2.0
17
100
0
68
58
5
11
23
1.55

Tables:   1

The End!