Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018114.1 Corchorus olitorius cultivar O-4 contig18147, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1480

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
789--823
16
2.2
16
89
0
52
54
2
22
20
1.58
858--957
27
4.0
27
70
26
94
63
1
7
29
1.27
859--1055
23
8.4
25
70
18
120
62
0
9
26
1.29
886--1006
11
10.7
11
72
8
55
65
0
8
26
1.21
856--1074
44
4.9
44
91
1
312
63
0
9
26
1.29
859--1098
27
8.5
28
65
24
78
63
0
9
26
1.28
976--1109
62
2.1
63
86
6
193
64
0
10
25
1.25
859--1097
4
60.0
4
65
16
86
63
0
9
26
1.27
874--1113
19
12.5
19
75
15
183
63
0
9
26
1.28

Tables:   1

The End!