Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018115.1 Corchorus olitorius cultivar O-4 contig18148, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30177

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9104--9139
18
1.9
19
94
5
65
41
0
0
58
0.98
11501--11564
22
2.9
22
77
13
69
54
6
3
35
1.41
11931--11956
12
2.2
12
100
0
52
38
0
26
34
1.57
23326--23428
35
2.9
35
81
11
120
40
16
16
26
1.89
23326--23422
36
2.7
34
84
10
115
38
17
16
27
1.91
24029--24078
23
2.2
22
82
3
55
46
34
10
10
1.71
25590--25718
41
3.1
41
90
0
195
44
16
15
23
1.85
27898--27947
22
2.3
22
92
0
82
50
18
18
14
1.79
28301--28375
28
2.7
28
97
0
141
41
25
16
17
1.89
29239--29534
163
1.8
163
85
2
425
30
19
18
32
1.96

Tables:   1

The End!