Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018116.1 Corchorus olitorius cultivar O-4 contig18149, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5860

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
143--351
29
7.2
29
82
5
217
36
25
19
18
1.94
153--348
86
2.3
87
87
4
297
37
24
19
18
1.94
595--1048
58
7.9
58
91
2
700
42
15
15
26
1.87
595--1048
115
3.9
116
91
2
700
42
15
15
26
1.87
602--1048
173
2.6
172
91
2
700
42
15
15
26
1.87
1871--1968
37
2.7
37
83
1
117
10
25
15
48
1.76

Tables:   1

The End!