Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018117.1 Corchorus olitorius cultivar O-4 contig18150, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10354

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4054--4143
32
2.8
32
93
0
153
27
25
20
26
1.99
4589--4639
25
2.0
25
84
3
66
13
19
13
52
1.73
4604--4650
25
1.9
25
86
4
69
10
17
19
53
1.72
5717--5757
21
2.0
21
85
0
55
29
19
12
39
1.88
7337--7521
27
6.6
28
84
7
209
16
43
21
18
1.88
7345--7521
57
3.2
57
93
4
290
17
42
20
18
1.89
7337--7521
84
2.2
84
86
7
252
16
43
21
18
1.88
9898--10083
32
5.8
32
94
0
327
32
26
17
23
1.97

Tables:   1

The End!