Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018119.1 Corchorus olitorius cultivar O-4 contig18152, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2977

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1212--1359
4
38.8
4
66
17
50
66
0
6
25
1.20
1257--1304
25
1.9
25
83
8
62
68
0
6
25
1.12
1279--1358
31
2.6
31
75
15
85
68
0
8
22
1.16
2821--2977
35
4.3
37
87
6
207
41
19
13
26
1.88
2840--2977
37
3.8
37
88
5
192
42
18
13
26
1.86
2840--2977
75
1.9
73
89
6
215
42
18
13
26
1.86

Tables:   1

The End!