Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018135.1 Corchorus olitorius cultivar O-4 contig18168, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59846

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--2601
322
8.0
325
80
8
2392
36
15
14
33
1.88
2--2601
651
4.0
634
77
9
2348
36
15
14
33
1.88
2708--2732
2
12.5
2
100
0
50
48
0
0
52
1.00
22186--22238
23
2.3
23
84
9
74
30
13
13
43
1.82
27067--27101
11
3.2
11
91
0
61
80
17
2
0
0.84
39479--39514
2
18.0
2
100
0
72
50
0
0
50
1.00
44236--44323
24
3.4
24
75
18
88
45
0
29
25
1.54

Tables:   1

The End!