Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018136.1 Corchorus olitorius cultivar O-4 contig18169, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51282

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13947--13980
2
17.0
2
93
0
59
47
0
2
50
1.16
16213--16249
2
19.5
2
89
10
60
45
0
0
54
1.00
16215--16249
15
2.3
15
100
0
70
45
0
0
54
0.99
19968--19997
6
4.8
6
95
4
51
33
0
36
30
1.58
22829--22857
13
2.2
13
100
0
58
17
10
0
72
1.11
31536--31594
19
3.0
19
78
9
73
35
10
22
32
1.87
32945--32971
2
13.5
2
100
0
54
48
0
0
51
1.00
35051--35080
3
10.0
3
100
0
60
66
0
0
33
0.92
37438--37471
13
2.5
13
90
4
50
79
0
20
0
0.73
37953--38008
12
4.9
12
76
6
55
80
0
10
8
0.91
42505--42552
17
2.8
17
81
6
53
22
20
20
35
1.96
45672--45719
21
2.3
21
79
13
55
27
2
16
54
1.54

Tables:   1

The End!