Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018137.1 Corchorus olitorius cultivar O-4 contig18170, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39589

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8542--8583
23
1.9
21
85
9
57
28
0
4
66
1.12
17100--17258
76
2.1
76
80
6
180
35
9
19
35
1.84
27196--27289
47
2.0
47
97
0
179
31
25
24
18
1.97
31694--31732
18
2.2
18
95
0
69
23
25
30
20
1.98
34190--34231
22
1.9
21
85
9
57
47
0
0
52
1.00
36091--36125
6
5.8
6
96
0
61
34
17
28
20
1.95
38954--39010
25
2.4
25
88
5
82
31
5
3
59
1.36

Tables:   1

The End!