Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018148.1 Corchorus olitorius cultivar O-4 contig18181, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8114

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1125--1158
15
2.4
14
90
5
50
11
0
0
88
0.52
6967--7058
39
2.5
34
91
7
103
33
8
27
30
1.87
7099--7177
40
2.1
34
76
23
104
40
8
21
29
1.83
6917--7285
41
9.2
39
87
6
420
36
7
25
31
1.84
6917--7285
121
3.1
119
87
4
501
36
7
25
31
1.84

Tables:   1

The End!