Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018153.1 Corchorus olitorius cultivar O-4 contig18186, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80215

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3187--3226
21
2.0
20
85
5
53
20
17
27
35
1.95
12123--12160
2
19.0
2
100
0
76
50
0
0
50
1.00
33047--33203
78
2.0
78
96
0
287
35
14
9
40
1.78
35475--35674
100
2.0
100
100
0
400
38
21
15
26
1.92
37422--37455
16
2.2
16
90
10
54
41
14
5
38
1.70
37741--37787
23
2.0
23
84
8
60
34
27
6
31
1.82
48939--48988
22
2.6
18
87
12
64
16
4
34
46
1.65
60691--60721
16
2.0
16
93
6
55
32
41
6
19
1.77
68515--68578
21
3.2
20
80
8
76
40
12
17
29
1.86

Tables:   1

The End!