Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018156.1 Corchorus olitorius cultivar O-4 contig18189, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49775

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4341--4380
16
2.7
15
81
11
55
60
2
0
37
1.11
16857--16907
21
2.4
21
96
0
93
9
50
9
29
1.67
22221--22259
19
2.1
19
85
9
53
48
23
10
17
1.78
31149--31185
19
1.9
19
88
0
56
59
5
0
35
1.20
32546--32629
38
2.2
40
84
4
109
26
17
13
42
1.86
41452--41512
31
2.0
29
90
6
95
36
9
11
42
1.74
41747--41783
19
1.9
19
88
0
56
32
18
10
37
1.86

Tables:   1

The End!