Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018165.1 Corchorus olitorius cultivar O-4 contig18198, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  99739

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20478--20542
31
2.1
31
94
0
112
36
7
15
40
1.76
37526--37585
31
1.9
31
100
0
120
40
16
16
26
1.90
68488--68568
24
3.4
24
81
13
87
18
44
19
17
1.87
74319--74377
16
3.7
16
80
6
66
6
35
0
57
1.25
92785--92846
32
1.9
32
83
0
79
50
1
9
38
1.45
93869--93900
14
2.3
14
94
0
55
43
25
6
25
1.77
94231--94268
2
20.0
2
89
10
62
50
0
0
50
1.00

Tables:   1

The End!