Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018170.1 Corchorus olitorius cultivar O-4 contig18203, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9499

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
293--3729
336
10.3
336
85
5
4022
34
16
16
32
1.91
3755--4659
328
2.7
328
80
5
952
35
16
14
34
1.88
4650--4683
2
17.0
2
100
0
68
50
0
0
50
1.00
5492--5556
33
2.0
33
96
0
121
41
15
13
29
1.86
7757--8075
20
15.7
19
70
12
129
28
28
6
36
1.82
7755--8131
41
9.2
41
90
2
537
28
27
6
37
1.83

Tables:   1

The End!