Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018171.1 Corchorus olitorius cultivar O-4 contig18204, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8362

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2026--2384
20
17.7
19
68
12
128
28
27
6
36
1.82
2024--2399
41
9.2
41
92
1
535
28
27
6
36
1.82
6586--6631
13
3.7
12
81
18
58
84
15
0
0
0.62
6585--6636
21
2.4
22
90
9
81
84
15
0
0
0.62
6592--6636
6
7.7
6
85
9
58
84
15
0
0
0.62
6585--6636
5
10.8
5
80
19
58
84
15
0
0
0.62

Tables:   1

The End!