Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018177.1 Corchorus olitorius cultivar O-4 contig18210, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38269

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3599--3626
6
4.7
6
100
0
56
35
0
35
28
1.58
6383--6632
121
2.0
127
89
7
386
38
10
1
49
1.47
7331--7361
16
1.9
16
93
0
53
16
6
25
51
1.68
20267--20539
92
2.9
93
88
5
376
30
15
21
32
1.94
37696--37821
2
57.0
2
98
1
144
45
0
45
9
1.36
37752--37789
3
12.7
3
100
0
76
34
0
34
31
1.58

Tables:   1

The End!