Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018183.1 Corchorus olitorius cultivar O-4 contig18216, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53312

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
836--941
54
2.0
52
90
3
167
39
11
13
35
1.80
2980--3014
15
2.3
15
90
0
52
54
5
40
0
1.24
6752--6779
7
4.0
7
100
0
56
57
0
14
28
1.38
12414--12505
34
2.7
34
91
1
139
8
9
27
54
1.62
32738--32834
46
2.1
47
96
3
180
30
9
16
43
1.79
35733--35765
16
2.0
17
88
5
50
21
12
15
51
1.75
49840--49923
40
2.1
40
95
0
150
27
19
5
47
1.72

Tables:   1

The End!