Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018186.1 Corchorus olitorius cultivar O-4 contig18219, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17383

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--40
2
18.0
2
100
0
72
50
0
0
50
1.00
1336--1377
19
2.3
18
84
8
57
61
0
2
35
1.09
1341--1377
19
2.0
19
89
5
58
64
0
0
35
0.94
5000--5035
18
2.0
18
88
0
54
25
41
8
25
1.83
6090--6131
20
2.1
20
90
0
66
38
7
21
33
1.81
15645--15741
48
2.0
48
100
0
194
18
30
16
34
1.93

Tables:   1

The End!