Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018194.1 Corchorus olitorius cultivar O-4 contig18227, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15689

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
195--222
10
2.8
10
100
0
56
7
53
10
28
1.62
423--486
32
2.0
32
96
0
119
21
17
0
60
1.35
3604--3704
52
1.9
52
95
0
184
32
17
15
33
1.92
3772--3917
73
2.0
73
98
0
283
28
19
24
26
1.99
4006--4073
33
2.1
33
97
0
127
60
8
7
23
1.52
5534--5567
16
2.1
16
88
0
50
50
2
0
47
1.16
11865--11906
21
2.0
21
95
0
75
19
21
26
33
1.97
14350--14560
33
6.4
33
78
6
178
27
9
19
42
1.82
14350--14512
66
2.5
66
92
0
272
26
9
20
43
1.82
14350--14560
66
3.2
66
85
4
203
27
9
19
42
1.82
14870--15015
33
4.5
31
78
10
123
42
21
8
27
1.82

Tables:   1

The End!