Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018199.1 Corchorus olitorius cultivar O-4 contig18232, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9537

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1189--1243
26
2.2
24
87
6
74
18
1
25
54
1.53
1265--1423
61
2.6
60
92
3
248
20
2
23
53
1.58
2004--2043
9
4.4
9
93
0
62
37
0
37
25
1.56
2141--2213
21
3.4
21
80
1
92
42
2
39
15
1.61
2132--2213
43
1.9
43
92
2
139
41
2
40
15
1.61
6011--6081
21
3.4
21
94
0
115
28
14
28
29
1.95
6951--6997
26
1.9
24
87
12
69
27
27
4
40
1.75

Tables:   1

The End!