Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018208.1 Corchorus olitorius cultivar O-4 contig18241, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11218

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6757--6781
12
2.1
12
100
0
50
48
8
20
24
1.76
6862--6915
23
2.4
23
87
6
76
48
9
24
18
1.77
6874--6916
23
1.9
22
95
4
77
44
13
23
18
1.86
6874--6922
23
2.2
22
89
7
73
42
16
22
18
1.88
6880--6929
23
2.2
23
82
7
57
46
18
20
16
1.85
7887--7943
30
1.9
29
89
10
89
21
14
5
59
1.54
8983--9012
15
2.0
15
93
0
51
30
13
13
43
1.82
9445--9482
18
2.1
19
90
5
60
39
7
21
31
1.82
10892--10927
19
1.9
18
88
5
54
41
8
22
27
1.82

Tables:   1

The End!