Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018216.1 Corchorus olitorius cultivar O-4 contig18249, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15676

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7101--7157
30
1.9
30
92
3
98
35
29
21
14
1.92
7097--7471
29
12.8
29
80
4
317
38
22
18
21
1.94
7097--7471
88
4.3
86
78
7
283
38
22
18
21
1.94
7738--8039
58
5.2
58
95
1
523
43
14
15
27
1.85
8896--8967
32
2.2
32
85
4
101
11
19
12
56
1.65
13047--13076
15
1.9
16
93
6
53
43
13
6
36
1.70
13988--14012
11
2.3
11
100
0
50
64
28
0
8
1.22

Tables:   1

The End!