Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018227.1 Corchorus olitorius cultivar O-4 contig18260, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54989

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4010--4037
2
14.0
2
100
0
56
50
0
0
50
1.00
7924--7959
12
3.2
12
84
15
58
0
8
0
91
0.41
7930--7958
10
2.9
10
100
0
58
0
6
0
93
0.36
8376--8418
11
3.8
11
82
14
52
41
0
2
55
1.12
8377--8418
23
1.9
22
85
9
59
40
0
2
57
1.12
8723--8751
2
15.0
2
92
7
51
51
0
0
48
1.00
11514--11564
21
2.5
21
87
3
68
29
7
11
50
1.67
14725--14753
6
4.8
6
100
0
58
0
34
48
17
1.47
22311--22352
20
2.0
20
86
9
57
35
4
38
21
1.75
28251--28311
31
2.0
31
86
0
86
39
11
9
39
1.75
28285--28352
29
2.3
30
82
7
86
33
22
7
36
1.82
30813--30866
21
2.6
21
75
13
58
18
5
3
72
1.20
33512--33558
12
3.8
12
94
2
76
36
8
21
34
1.84
34419--34454
10
3.6
10
88
0
54
33
5
19
41
1.75
41726--41752
2
13.5
2
100
0
54
48
51
0
0
1.00

Tables:   1

The End!