Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018231.1 Corchorus olitorius cultivar O-4 contig18264, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56673

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4690--4760
21
3.4
21
92
3
108
29
18
25
26
1.98
5627--5673
26
1.9
24
87
12
69
27
27
4
40
1.75
11067--11158
21
4.4
21
95
2
159
28
18
27
26
1.98
24522--24549
2
14.0
2
100
0
56
50
0
0
50
1.00
25651--25692
21
2.0
21
100
0
84
23
14
33
28
1.94
25748--25805
19
2.9
19
78
9
62
37
8
20
32
1.83
40967--41007
21
1.9
22
85
5
57
9
17
29
43
1.80
49325--49371
21
2.3
20
82
13
53
38
4
38
19
1.71

Tables:   1

The End!