Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018232.1 Corchorus olitorius cultivar O-4 contig18265, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20960

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
336--402
28
2.3
28
84
5
80
44
11
20
22
1.84
357--411
28
2.0
28
92
0
92
43
10
20
25
1.84
770--794
2
12.5
2
100
0
50
48
0
0
52
1.00
9306--9400
40
2.3
42
81
7
122
32
9
15
42
1.80
9433--9506
29
2.6
29
88
0
112
51
17
6
24
1.69
12084--12151
34
2.1
32
86
5
91
23
5
8
61
1.47

Tables:   1

The End!