Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018246.1 Corchorus olitorius cultivar O-4 contig18279, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47931

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7236--7324
29
3.1
29
66
18
87
32
8
15
42
1.78
9999--10023
9
2.8
9
100
0
50
32
20
0
48
1.50
11269--11651
178
2.1
177
84
4
493
37
14
14
33
1.87
12093--12203
56
2.0
56
94
0
195
49
7
16
27
1.71
25971--26015
16
2.8
16
89
0
72
37
42
15
4
1.67
26509--26580
31
2.3
31
75
17
78
26
4
8
61
1.43
27037--27143
16
6.7
16
74
12
94
41
37
13
8
1.74
27037--27143
32
3.3
32
84
5
135
41
37
13
8
1.74
27795--27836
2
21.0
2
100
0
84
50
0
0
50
1.00
32758--32794
18
2.0
19
89
5
58
24
16
56
2
1.53
38796--38848
26
2.0
26
100
0
106
11
18
15
54
1.70
39405--39929
261
2.0
264
93
1
896
36
18
22
22
1.95
42671--42724
21
2.4
24
79
17
62
31
33
1
33
1.69
42909--42946
15
2.5
15
86
0
58
34
21
10
34
1.87

Tables:   1

The End!