Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018247.1 Corchorus olitorius cultivar O-4 contig18280, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42282

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4742--4862
60
2.0
60
96
1
226
47
15
6
29
1.71
12290--12401
54
2.1
54
100
0
224
36
8
25
29
1.86
15255--15355
33
3.1
33
100
0
202
24
11
17
45
1.82
16485--16726
127
1.9
127
87
1
351
32
15
16
35
1.90
30029--30060
15
2.1
15
100
0
64
18
18
12
50
1.78
30051--30102
27
1.9
27
88
0
77
30
15
9
44
1.78
33076--33102
14
1.9
14
100
0
54
22
11
0
66
1.22
34310--34393
44
2.0
44
88
6
129
10
16
14
58
1.63
35378--35409
16
2.0
16
100
0
64
18
18
18
43
1.88
41094--41184
48
2.0
45
91
8
148
36
6
13
43
1.70

Tables:   1

The End!