Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018254.1 Corchorus olitorius cultivar O-4 contig18287, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30242

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--194
9
21.6
9
100
0
388
0
22
44
33
1.53
275--372
2
53.5
2
66
20
54
45
1
0
53
1.07
289--377
25
3.7
25
77
14
89
44
1
0
53
1.07
452--488
13
2.8
13
100
0
74
37
32
21
8
1.83
618--735
58
2.0
58
100
0
236
36
25
17
20
1.94
1664--1729
33
2.0
33
100
0
132
51
9
18
21
1.73
11046--11078
13
2.5
13
85
14
50
24
9
0
66
1.20
11098--11145
16
3.1
16
72
6
53
54
6
0
39
1.26
21418--21495
33
2.4
33
93
0
138
43
12
7
35
1.72

Tables:   1

The End!