Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018259.1 Corchorus olitorius cultivar O-4 contig18292, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41465

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13191--13228
2
19.0
2
100
0
76
50
0
0
50
1.00
22933--22960
1
28.0
1
100
0
56
0
0
0
100
0.00
23411--23498
3
29.3
3
89
0
113
57
0
40
1
1.06
24867--24927
26
2.3
26
94
0
104
11
50
9
27
1.70
30502--30545
12
3.4
12
87
9
52
47
0
40
11
1.39
31213--31263
26
2.0
26
88
0
75
9
13
11
64
1.49
31127--31524
139
2.9
137
96
2
735
21
14
15
48
1.80
31353--31402
25
2.0
24
84
3
64
10
16
10
64
1.50
33977--34023
21
2.2
21
92
0
76
25
21
14
38
1.92
36588--36662
30
2.4
33
78
19
104
44
6
1
48
1.37
36597--36661
30
2.2
30
91
5
105
44
6
1
47
1.37
36733--36774
11
3.7
11
87
6
57
52
16
14
16
1.75
39151--39192
21
2.0
22
90
4
68
42
19
7
30
1.78
41256--41342
3
29.3
3
97
2
167
33
0
0
66
0.92

Tables:   1

The End!