Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018263.1 Corchorus olitorius cultivar O-4 contig18296, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27379

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
148--177
2
15.0
2
100
0
60
50
0
0
50
1.00
3187--3240
27
2.0
27
82
7
65
1
53
0
44
1.11
4267--4317
22
2.3
22
75
18
52
35
5
13
45
1.68
8793--9790
336
3.0
336
93
0
1681
22
24
18
34
1.96
13250--13310
31
2.0
31
93
0
104
39
11
8
40
1.71
18075--18110
18
2.0
18
100
0
72
44
16
5
33
1.71
22455--22544
30
3.1
30
66
4
76
20
6
30
43
1.77
24072--24240
90
1.9
90
93
0
293
36
23
12
28
1.91

Tables:   1

The End!