Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018268.1 Corchorus olitorius cultivar O-4 contig18301, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17545

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3365--3424
30
2.0
31
90
3
95
38
28
13
20
1.90
8899--8948
1
50.0
1
95
0
91
98
0
0
2
0.14
12136--12173
18
2.1
18
100
0
76
5
15
15
63
1.48
13384--13408
2
12.5
2
100
0
50
52
0
0
48
1.00
13534--13701
31
5.6
29
69
16
119
33
18
19
27
1.95
13538--13699
60
2.7
59
88
7
238
35
17
19
27
1.95
13569--13665
29
3.3
28
71
16
79
35
16
18
29
1.93
13744--13907
60
2.7
59
91
4
267
28
15
20
35
1.93
15970--15997
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!